data prep spatial layers
read in some data A and data B. Modify some things, and save as layer 1.
data prep other layers
This sources a script that modifies another new layer (tableC) and saves it as table2 and table3, external to the direct Rmd path. It also sources a separate script that reads a previously-saved layer (table 1) and gapfills, saving as table1a.
model
sourced script reads in layers 1a, 2, and 3, and does some stuff, and saves the results as layers D and E.
using peek_csv: check to see if tablex.csv shows up in the log?
| 1 |
49060 |
0.205263 |
-0.136364 |
57 |
441 |
aquamaps |
| 2 |
49061 |
0.203279 |
-0.141304 |
61 |
46 |
aquamaps |
| 3 |
49780 |
0.171963 |
-0.153226 |
107 |
62 |
aquamaps |
| 4 |
49781 |
0.181818 |
-0.150000 |
99 |
60 |
aquamaps |
| 5 |
50494 |
0.150781 |
-0.146154 |
128 |
65 |
aquamaps |
|
Provenance
- Run ID: 12 (6cb645b); run tag: “standard run”
- Run elapsed time: 9.326 seconds; run memory usage: NA MB
- System info: System: Darwin, Release: 15.4.0. Machine: x86_64. User: ohara.
- Session info
- R version: R version 3.2.2 (2015-08-14), Platform: x86_64-apple-darwin13.4.0, Running under: OS X 10.11.4 (El Capitan).
- Attached base packages: stats, graphics, grDevices, utils, datasets, methods, base
- Other attached packages: stringr_1.0.0, readr_0.2.2, dplyr_0.4.3
Provenance summary for run 12 (6cb645b): standard run (Wed May 4 11:20:45 2016)
| table1.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
893b676 |
| table1a.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
a7e123b |
| table2.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
a7e123b |
| table3.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
a7e123b |
| tableA.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
8b48c04 |
| tableB.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
00b6e10 |
| tableC.csv |
/Users/ohara/github/ohibc/rmd_testing |
input |
FALSE |
00b6e10 |
| table1.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
893b676 |
| table1a.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
a7e123b |
| table2.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
a7e123b |
| table3.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
a7e123b |
| tableD.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
a7e123b |
| tableE.csv |
/Users/ohara/github/ohibc/rmd_testing |
output |
FALSE |
a7e123b |
| 0_sample_script.Rmd |
/Users/ohara/github/ohibc/rmd_testing/. |
parent_script |
TRUE |
725220e |
| 1_data_prep_sample.R |
. |
sourced_script |
FALSE |
725220e |
| 1a_gapfill.R |
. |
sourced_script |
FALSE |
725220e |
| 2_model_sample.R |
/Users/ohara/github/ohibc/rmd_testing |
sourced_script |
FALSE |
725220e |